Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1368 | DVU_2310 | DVU_1368 | DVU_2310 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Identified by match to protein family HMM PF00753. | 0.720 |
| DVU_1368 | DVU_2562 | DVU_1368 | DVU_2562 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Acyl carrier protein, putative; Identified by similarity to SP:P20804. | 0.762 |
| DVU_1368 | DVU_3212 | DVU_1368 | DVU_3212 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852. | 0.720 |
| DVU_1368 | acpP | DVU_1368 | DVU_1205 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.760 |
| DVU_1368 | arsC | DVU_1368 | DVU_1646 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Arsenate reductase; Identified by similarity to SP:P45947; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.647 |
| DVU_1368 | mraW | DVU_1368 | DVU_2512 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.508 |
| DVU_1368 | truA | DVU_1368 | DVU_0911 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.618 |
| DVU_1368 | ybeY | DVU_1368 | DVU_1883 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.743 |
| DVU_1973 | DVU_2310 | DVU_1973 | DVU_2310 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Identified by match to protein family HMM PF00753. | 0.633 |
| DVU_1973 | DVU_2562 | DVU_1973 | DVU_2562 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Acyl carrier protein, putative; Identified by similarity to SP:P20804. | 0.513 |
| DVU_1973 | DVU_3212 | DVU_1973 | DVU_3212 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852. | 0.516 |
| DVU_1973 | acpP | DVU_1973 | DVU_1205 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.509 |
| DVU_1973 | arsC | DVU_1973 | DVU_1646 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Arsenate reductase; Identified by similarity to SP:P45947; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.555 |
| DVU_1973 | mraW | DVU_1973 | DVU_2512 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.495 |
| DVU_1973 | truA | DVU_1973 | DVU_0911 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.529 |
| DVU_1973 | ybeY | DVU_1973 | DVU_1883 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.750 |
| DVU_2310 | DVU_1368 | DVU_2310 | DVU_1368 | Identified by match to protein family HMM PF00753. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.720 |
| DVU_2310 | DVU_1973 | DVU_2310 | DVU_1973 | Identified by match to protein family HMM PF00753. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.633 |
| DVU_2310 | DVU_2562 | DVU_2310 | DVU_2562 | Identified by match to protein family HMM PF00753. | Acyl carrier protein, putative; Identified by similarity to SP:P20804. | 0.582 |
| DVU_2310 | DVU_2696 | DVU_2310 | DVU_2696 | Identified by match to protein family HMM PF00753. | Conserved hypothetical protein; Identified by similarity to OMNI:NMB1083. | 0.663 |
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