DVU_2340 protein (Desulfovibrio vulgaris Hildenborough)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

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gene neighborhood

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protein homology

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Score

DVU_2340

Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (230 aa)

Predicted Functional Partners:

DVU_1238

0.980

DVU_0966

0.978

glnH

0.974

DVU_0386

0.969

DVU_2343

0.969

DVU_0105

0.945

DVU_0753

0.945

DVU_1236

0.943

DVU_0968

0.942

DVU_2342

0.937

Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0105	DVU_0386	DVU_0105	DVU_0386	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	0.687
DVU_0105	DVU_0966	DVU_0105	DVU_0966	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	0.685
DVU_0105	DVU_1238	DVU_0105	DVU_1238	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by similarity to SP:P30859; match to protein family HMM PF00497.	0.747
DVU_0105	DVU_2340	DVU_0105	DVU_2340	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.945
DVU_0105	DVU_2342	DVU_0105	DVU_2342	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.	0.791
DVU_0105	glnH	DVU_0105	DVU_0107	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	Glutamine ABC transporter, periplasmic glutamine-binding protein; Identified by similarity to SP:P10344; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.	0.981
DVU_0386	DVU_0105	DVU_0386	DVU_0105	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	0.687
DVU_0386	DVU_0753	DVU_0386	DVU_0753	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	0.569
DVU_0386	DVU_0968	DVU_0386	DVU_0968	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.596
DVU_0386	DVU_1236	DVU_0386	DVU_1236	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:Q52815; match to protein family HMM PF00005.	0.624
DVU_0386	DVU_2340	DVU_0386	DVU_2340	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.969
DVU_0386	DVU_2343	DVU_0386	DVU_2343	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.595
DVU_0753	DVU_0386	DVU_0753	DVU_0386	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	0.569
DVU_0753	DVU_0966	DVU_0753	DVU_0966	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	0.637
DVU_0753	DVU_1238	DVU_0753	DVU_1238	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by similarity to SP:P30859; match to protein family HMM PF00497.	0.666
DVU_0753	DVU_2340	DVU_0753	DVU_2340	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.945
DVU_0753	DVU_2342	DVU_0753	DVU_2342	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.	0.815
DVU_0753	glnH	DVU_0753	DVU_0107	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	Glutamine ABC transporter, periplasmic glutamine-binding protein; Identified by similarity to SP:P10344; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.	0.555
DVU_0966	DVU_0105	DVU_0966	DVU_0105	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Glutamine ABC transporter, ATP-binding protein; Identified by similarity to SP:P10346; match to protein family HMM PF00005.	0.685
DVU_0966	DVU_0753	DVU_0966	DVU_0753	Amino acid ABC transporter, periplasmic amino acid-binding protein; Identified by match to protein family HMM PF00497.	Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.	0.637

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