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DVU_2352 DVU_2352 DVU_2354 DVU_2354 DVU_2353 DVU_2353 DVU_0117 DVU_0117 DVU_0697 DVU_0697 DVU_3201 DVU_3201 DVU_3140 DVU_3140 DVU_2077 DVU_2077 DVU_1215 DVU_1215 DVU_1214 DVU_1214 DVU_0902 DVU_0902
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2352Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. (545 aa)    
Predicted Functional Partners:
DVU_2354
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
     0.701
DVU_2353
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
    
0.664
DVU_0117
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
  
 0.614
DVU_0697
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.609
DVU_3201
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.584
DVU_3140
Capsular polysaccharide transport protein, putative; Identified by similarity to GP:2801417; match to protein family HMM PF02563.
 
  
 0.519
DVU_2077
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02MA3501; match to protein family HMM PF03130.
  
     0.513
DVU_1215
Identified by match to protein family HMM PF01569.
 
  
 0.511
DVU_1214
Identified by match to protein family HMM PF02366.
 
   
 0.489
DVU_0902
TPR domain protein; Identified by match to protein family HMM PF00515.
 
     0.444
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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