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DVU_2364 DVU_2364 hdrA hdrA DVU_2104 DVU_2104 dapB dapB DVU_3032 DVU_3032 DVU_3033 DVU_3033 DVU_2365 DVU_2365 DVU_2366 DVU_2366 DVU_1456 DVU_1456 DVU_0462 DVU_0462
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2364Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155. (388 aa)    
Predicted Functional Partners:
hdrA
Heterodisulfide reductase, A subunit; Identified by similarity to GP:12642418; match to protein family HMM PF00037.
   
   0.840
DVU_2104
Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991.
   
   0.836
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
 
 
    0.723
DVU_3032
Conserved hypothetical protein; Identified by similarity to OMNI:HP0137; match to protein family HMM PF02589.
   
   0.677
DVU_3033
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
   
   0.677
DVU_2365
Conserved hypothetical protein; Identified by similarity to OMNI:CC1910.
  
    0.670
DVU_2366
Hypothetical protein; Identified by Glimmer2; putative.
       0.492
DVU_1456
Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
   
    0.470
DVU_0462
Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807.
  
  
 0.467
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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