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hdrC hdrC hdrA hdrA hdrB hdrB DVU_2401 DVU_2401 DVU_2400 DVU_2400 DVU_2399 DVU_2399 DVU_0849 DVU_0849 DVU_0848 DVU_0848 DVU_2398 DVU_2398 DVU_3033 DVU_3033 DVU_2947 DVU_2947
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
hdrCHeterodisulfide reductase, C subunit; Identified by similarity to GP:12642421. (186 aa)    
Predicted Functional Partners:
hdrA
Heterodisulfide reductase, A subunit; Identified by similarity to GP:12642418; match to protein family HMM PF00037.
 
 
 0.999
hdrB
Heterodisulfide reductase, B subunit; Identified by similarity to GP:3378542; match to protein family HMM PF02754.
 
 0.999
DVU_2401
Hydrogenase, iron-sulfur cluster-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662.
 
  
 0.969
DVU_2400
Hydrogenase, putative; Identified by similarity to GP:21327885.
 
    0.959
DVU_2399
Hydrogenase, putative; Identified by similarity to GP:21327886; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
  
 0.933
DVU_0849
Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662.
 
  
 0.889
DVU_0848
Heterodisulfide reductase, putative; Identified by similarity to GP:1890204.
 
  
 0.872
DVU_2398
Conserved hypothetical protein; Identified by similarity to OMNI:TM0095.
 
    0.813
DVU_3033
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
 
 
 0.792
DVU_2947
Anaerobic ribonucleoside-triphosphate reductase, putative; Identified by similarity to GP:4127320; match to protein family HMM PF03477.
   
   0.747
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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