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DVU_2405 DVU_2405 DVU_2400 DVU_2400 DVU_2406 DVU_2406 poR poR putA putA glgA glgA hdrB hdrB DVU_2825 DVU_2825 DVU_3294 DVU_3294 hdrC hdrC DVU_2483 DVU_2483
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2405Alcohol dehydrogenase, iron-containing; Identified by similarity to GP:2393887; match to protein family HMM PF00465. (393 aa)    
Predicted Functional Partners:
DVU_2400
Hydrogenase, putative; Identified by similarity to GP:21327885.
  
  
 0.725
DVU_2406
Hypothetical protein; Identified by Glimmer2; putative.
       0.664
poR
Pyruvate-ferredoxin oxidoreductase; Identified by similarity to GP:1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855.
  
  
 0.615
putA
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
 
 
 0.612
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.611
hdrB
Heterodisulfide reductase, B subunit; Identified by similarity to GP:3378542; match to protein family HMM PF02754.
  
  
 0.519
DVU_2825
Pyruvate formate-lyase 1 activating enzyme, putative; Identified by similarity to SP:P09374; similar to SP:Q46267; match to protein family HMM PF00037; match to protein family HMM PF04055.
  
  
 0.512
DVU_3294
Aldehyde dehydrogenase (NADP) family protein; Identified by match to protein family HMM PF00171.
 
 
 0.503
hdrC
Heterodisulfide reductase, C subunit; Identified by similarity to GP:12642421.
  
    0.493
DVU_2483
Cytochrome c family protein; Identified by similarity to SP:P00135; match to protein family HMM PF02085.
   
    0.475
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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