Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_0810 | DVU_1338 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to OMNI:SO3257. | 0.418 |
DVU_0810 | DVU_1589 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.777 |
DVU_0810 | DVU_2434 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.493 |
DVU_0810 | DVU_2436 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | 0.494 |
DVU_1338 | DVU_0810 | Conserved hypothetical protein; Identified by similarity to OMNI:SO3257. | Hypothetical protein; Identified by Glimmer2; putative. | 0.418 |
DVU_1338 | DVU_2436 | Conserved hypothetical protein; Identified by similarity to OMNI:SO3257. | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | 0.588 |
DVU_1589 | DVU_0810 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.777 |
DVU_1589 | DVU_2434 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.654 |
DVU_1589 | DVU_2436 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | 0.672 |
DVU_2434 | DVU_0810 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.493 |
DVU_2434 | DVU_1589 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.654 |
DVU_2434 | DVU_2435 | Hypothetical protein; Identified by Glimmer2; putative. | Transporter, CorA family; Identified by similarity to SP:P27841; match to protein family HMM PF01544. | 0.429 |
DVU_2434 | DVU_2436 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | 0.445 |
DVU_2435 | DVU_2434 | Transporter, CorA family; Identified by similarity to SP:P27841; match to protein family HMM PF01544. | Hypothetical protein; Identified by Glimmer2; putative. | 0.429 |
DVU_2435 | DVU_2436 | Transporter, CorA family; Identified by similarity to SP:P27841; match to protein family HMM PF01544. | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | 0.431 |
DVU_2436 | DVU_0810 | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | Hypothetical protein; Identified by Glimmer2; putative. | 0.494 |
DVU_2436 | DVU_1338 | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | Conserved hypothetical protein; Identified by similarity to OMNI:SO3257. | 0.588 |
DVU_2436 | DVU_1589 | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | Hypothetical protein; Identified by Glimmer2; putative. | 0.672 |
DVU_2436 | DVU_2434 | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | Hypothetical protein; Identified by Glimmer2; putative. | 0.445 |
DVU_2436 | DVU_2435 | Conserved hypothetical protein; Identified by similarity to OMNI:AF1432. | Transporter, CorA family; Identified by similarity to SP:P27841; match to protein family HMM PF01544. | 0.431 |
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