STRINGSTRING
DVU_2445 DVU_2445 DVU_2444 DVU_2444 DVU_0524 DVU_0524 DVU_0318 DVU_0318 DVU_0410 DVU_0410 panB panB DVU_2443 DVU_2443
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2445Hypothetical protein; Identified by Glimmer2; putative. (41 aa)    
Predicted Functional Partners:
DVU_2444
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
    0.963
DVU_0524
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.756
DVU_0318
TPR domain protein; Identified by match to protein family HMM PF00515.
   
    0.748
DVU_0410
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.557
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.518
DVU_2443
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01PM1881.
       0.456
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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