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DVU_2470 DVU_2470 DVU_1160 DVU_1160 htpX htpX msrB msrB DVU_1185 DVU_1185
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2470Membrane protein, putaive; Identified by similarity to SP:P75768; match to protein family HMM PF01027; Belongs to the BI1 family. (233 aa)    
Predicted Functional Partners:
DVU_1160
Urea transporter, putative; Urea channel that facilitates transmembrane urea transport down a concentration gradient; Belongs to the urea transporter family.
      
 0.705
htpX
Peptidase, M48 family; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family.
  
  
 0.624
msrB
Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.
  
   0.486
DVU_1185
Colicin V production family protein; Identified by match to protein family HMM PF02674.
   
    0.463
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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