Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0848 | DVU_0849 | DVU_0848 | DVU_0849 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | 0.998 |
| DVU_0848 | DVU_0850 | DVU_0848 | DVU_0850 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Heterodisulfide reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF00037. | 0.950 |
| DVU_0848 | DVU_2401 | DVU_0848 | DVU_2401 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Hydrogenase, iron-sulfur cluster-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | 0.995 |
| DVU_0848 | DVU_2471 | DVU_0848 | DVU_2471 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Oxidoreductase, selenocysteine-containing; Selenoprotein; identified by match to protein family HMM PF00037; match to protein family HMM PF02754. | 0.515 |
| DVU_0848 | DVU_3033 | DVU_0848 | DVU_3033 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754. | 0.819 |
| DVU_0848 | dsvA | DVU_0848 | DVU_0402 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Dissimilatory sulfite reductase alpha subunit; Part of the complex that catalyzes the reduction of sulfite to sulfide. The alpha and beta subunits may have arisen by gene duplication. They both bind 2 iron-sulfur clusters, but the alpha subunit seems to be catalytically inactive, due to substitutions along the putative substrate access channel, and because it binds sirohydrochlorin (the dematallated form of siroheme) instead of siroheme. | 0.706 |
| DVU_0848 | dvsB | DVU_0848 | DVU_0403 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Dissimilatory sulfite reductase beta subunit; Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria. | 0.472 |
| DVU_0848 | poR | DVU_0848 | DVU_3025 | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | Pyruvate-ferredoxin oxidoreductase; Identified by similarity to GP:1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855. | 0.560 |
| DVU_0849 | DVU_0848 | DVU_0849 | DVU_0848 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | 0.998 |
| DVU_0849 | DVU_0850 | DVU_0849 | DVU_0850 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Heterodisulfide reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF00037. | 0.995 |
| DVU_0849 | DVU_2401 | DVU_0849 | DVU_2401 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Hydrogenase, iron-sulfur cluster-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | 0.875 |
| DVU_0849 | DVU_2471 | DVU_0849 | DVU_2471 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Oxidoreductase, selenocysteine-containing; Selenoprotein; identified by match to protein family HMM PF00037; match to protein family HMM PF02754. | 0.682 |
| DVU_0849 | DVU_2522 | DVU_0849 | DVU_2522 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Hypothetical protein; Identified by Glimmer2; putative. | 0.569 |
| DVU_0849 | DVU_3033 | DVU_0849 | DVU_3033 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754. | 0.976 |
| DVU_0849 | dsvA | DVU_0849 | DVU_0402 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Dissimilatory sulfite reductase alpha subunit; Part of the complex that catalyzes the reduction of sulfite to sulfide. The alpha and beta subunits may have arisen by gene duplication. They both bind 2 iron-sulfur clusters, but the alpha subunit seems to be catalytically inactive, due to substitutions along the putative substrate access channel, and because it binds sirohydrochlorin (the dematallated form of siroheme) instead of siroheme. | 0.829 |
| DVU_0849 | dvsB | DVU_0849 | DVU_0403 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Dissimilatory sulfite reductase beta subunit; Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria. | 0.829 |
| DVU_0849 | poR | DVU_0849 | DVU_3025 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Pyruvate-ferredoxin oxidoreductase; Identified by similarity to GP:1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855. | 0.436 |
| DVU_0850 | DVU_0848 | DVU_0850 | DVU_0848 | Heterodisulfide reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF00037. | Heterodisulfide reductase, putative; Identified by similarity to GP:1890204. | 0.950 |
| DVU_0850 | DVU_0849 | DVU_0850 | DVU_0849 | Heterodisulfide reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF00037. | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | 0.995 |
| DVU_0850 | DVU_2401 | DVU_0850 | DVU_2401 | Heterodisulfide reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF00037. | Hydrogenase, iron-sulfur cluster-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | 0.696 |
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