STRINGSTRING
DVU_2522 DVU_2522 aroK-2 aroK-2 DVU_0400 DVU_0400 DVU_0850 DVU_0850 DVU_0651 DVU_0651 DVU_2523 DVU_2523 DVU_0691 DVU_0691 DVU_1241 DVU_1241 DVU_2471 DVU_2471 DVU_1460 DVU_1460 DVU_0245 DVU_0245
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2522Hypothetical protein; Identified by Glimmer2; putative. (200 aa)    
Predicted Functional Partners:
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
    0.802
DVU_0400
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.769
DVU_0850
Heterodisulfide reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF00037.
  
   
 0.766
DVU_0651
Membrane protein, putative.
  
    0.718
DVU_2523
Lipoprotein, putative.
  
    0.717
DVU_0691
Membrane protein, putative.
  
    0.699
DVU_1241
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01FN1126.
  
     0.646
DVU_2471
Oxidoreductase, selenocysteine-containing; Selenoprotein; identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
  
     0.641
DVU_1460
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.618
DVU_0245
Protein phosphatase, putative; Identified by match to protein family HMM PF00782.
  
     0.614
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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