STRINGSTRING
DVU_2596 DVU_2596 DVU_2604 DVU_2604 DVU_2598 DVU_2598 DVU_1721 DVU_1721 DVU_1715 DVU_1715 DVU_2595 DVU_2595 DVU_1458 DVU_1458 DVU_3073 DVU_3073 DVU_2597 DVU_2597 DVU_2127 DVU_2127 DVU_1724 DVU_1724
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2596Hypothetical protein; Identified by Glimmer2; putative. (259 aa)    
Predicted Functional Partners:
DVU_2604
Conserved hypothetical protein; Identified by similarity to GP:13186164.
 
    0.853
DVU_2598
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.828
DVU_1721
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.809
DVU_1715
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.805
DVU_2595
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.778
DVU_1458
Chemotaxis protein CheZ, putative; Identified by similarity to SP:P07800.
  
     0.668
DVU_3073
Conserved domain protein; Identified by similarity to OMNI:HI1195.
  
    0.582
DVU_2597
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.576
DVU_2127
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.
  
    0.510
DVU_1724
Phage uncharacterized protein, putative.
  
    0.506
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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