STRINGSTRING
DVU_2644 DVU_2644 DVU_2785 DVU_2785 hemK hemK ilvN-1 ilvN-1 ilvN-2 ilvN-2 DVU_2646 DVU_2646 putA putA DVU_0361 DVU_0361 DVU_2645 DVU_2645 DVU_2561 DVU_2561
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
DVU_2644Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392. (223 aa)    
Predicted Functional Partners:
DVU_2785
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
 
  
 0.706
hemK
hemK protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
 
 
   0.635
ilvN-1
Acetolactate synthase, small subunit; Identified by similarity to SP:P37252; match to protein family HMM PF01842; match to protein family HMM TIGR00119.
   
    0.583
ilvN-2
Acetolactate synthase, small subunit; Identified by similarity to SP:P00894; match to protein family HMM PF01842; match to protein family HMM TIGR00119.
   
    0.583
DVU_2646
1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01275.
 
    0.511
putA
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
  
 0.496
DVU_0361
Acetolactate synthase III, small subunit, putative; Identified by match to protein family HMM PF01842.
   
    0.491
DVU_2645
Na+/H+ antiporter family protein; Identified by similarity to SP:P27611.
  
    0.488
DVU_2561
Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
 
  
 0.468
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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