STRINGSTRING
DVU_2663 DVU_2663 DVU_2664 DVU_2664 DVU_2665 DVU_2665 DVU_2666 DVU_2666 DVU_2667 DVU_2667 DVU_2540 DVU_2540 DVU_2108 DVU_2108
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2663Conserved hypothetical protein; Identified by similarity to GP:19886926. (158 aa)    
Predicted Functional Partners:
DVU_2664
Phosphate ABC transporter, ATP-binding protein, putative; Identified by similarity to OMNI:NTL03PA05367; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
  
    0.820
DVU_2665
Phosphate ABC transporter, permease protein, putative; Identified by similarity to OMNI:NTL02MA0874; match to protein family HMM PF00528.
  
    0.711
DVU_2666
Phosphate ABC transporter, permease protein, putative; Identified by similarity to OMNI:NTL01MT01690; match to protein family HMM PF00528.
  
    0.620
DVU_2667
Phosphate ABC transporter, periplasmic phosphate-binding protein, putative; Identified by similarity to SP:P46338; match to protein family HMM TIGR02136.
  
    0.617
DVU_2540
2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by similarity to GP:38802; match to protein family HMM PF06050.
 
    0.425
DVU_2108
Identified by match to protein family HMM PF02579.
  
     0.418
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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