STRINGSTRING
DVU_2687 DVU_2687 DVU_2686 DVU_2686 DVU_2688 DVU_2688 DVU_2689 DVU_2689 DVU_2685 DVU_2685
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2687Hypothetical protein; Identified by Glimmer2; putative. (176 aa)    
Predicted Functional Partners:
DVU_2686
Peptidase, S24 family; Identified by match to protein family HMM PF00717.
       0.503
DVU_2688
Identified by similarity to SP:P07636; match to protein family HMM PF00665.
  
    0.419
DVU_2689
Bacteriophage DNA transposition B protein; Identified by similarity to SP:P03763.
  
    0.417
DVU_2685
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.415
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (20%) [HD]