Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_2685 | DVU_2686 | Hypothetical protein; Identified by Glimmer2; putative. | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | 0.605 |
DVU_2685 | DVU_2687 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.415 |
DVU_2686 | DVU_2685 | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | Hypothetical protein; Identified by Glimmer2; putative. | 0.605 |
DVU_2686 | DVU_2687 | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | Hypothetical protein; Identified by Glimmer2; putative. | 0.503 |
DVU_2686 | DVU_2688 | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | Identified by similarity to SP:P07636; match to protein family HMM PF00665. | 0.578 |
DVU_2686 | DVU_2689 | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | Bacteriophage DNA transposition B protein; Identified by similarity to SP:P03763. | 0.473 |
DVU_2687 | DVU_2685 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.415 |
DVU_2687 | DVU_2686 | Hypothetical protein; Identified by Glimmer2; putative. | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | 0.503 |
DVU_2687 | DVU_2688 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by similarity to SP:P07636; match to protein family HMM PF00665. | 0.419 |
DVU_2687 | DVU_2689 | Hypothetical protein; Identified by Glimmer2; putative. | Bacteriophage DNA transposition B protein; Identified by similarity to SP:P03763. | 0.417 |
DVU_2688 | DVU_2686 | Identified by similarity to SP:P07636; match to protein family HMM PF00665. | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | 0.578 |
DVU_2688 | DVU_2687 | Identified by similarity to SP:P07636; match to protein family HMM PF00665. | Hypothetical protein; Identified by Glimmer2; putative. | 0.419 |
DVU_2688 | DVU_2689 | Identified by similarity to SP:P07636; match to protein family HMM PF00665. | Bacteriophage DNA transposition B protein; Identified by similarity to SP:P03763. | 0.985 |
DVU_2689 | DVU_2686 | Bacteriophage DNA transposition B protein; Identified by similarity to SP:P03763. | Peptidase, S24 family; Identified by match to protein family HMM PF00717. | 0.473 |
DVU_2689 | DVU_2687 | Bacteriophage DNA transposition B protein; Identified by similarity to SP:P03763. | Hypothetical protein; Identified by Glimmer2; putative. | 0.417 |
DVU_2689 | DVU_2688 | Bacteriophage DNA transposition B protein; Identified by similarity to SP:P03763. | Identified by similarity to SP:P07636; match to protein family HMM PF00665. | 0.985 |