STRINGSTRING
DVU_2694 DVU_2694 DVU_2695 DVU_2695 DVU_2696 DVU_2696 DVU_2697 DVU_2697 DVU_2693 DVU_2693 DVU_2698 DVU_2698 DVU_2699 DVU_2699 DVU_2702 DVU_2702 DVU_2700 DVU_2700 DVU_2705 DVU_2705 DVU_2703 DVU_2703
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2694Hypothetical protein; Identified by Glimmer2; putative. (144 aa)    
Predicted Functional Partners:
DVU_2695
Conserved hypothetical protein.
  
    0.779
DVU_2696
Conserved hypothetical protein; Identified by similarity to OMNI:NMB1083.
       0.768
DVU_2697
Hypothetical protein; Identified by Glimmer2; putative.
       0.741
DVU_2693
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.569
DVU_2698
Lipoprotein, putative.
  
    0.567
DVU_2699
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
  
    0.512
DVU_2702
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NM01121.
  
    0.502
DVU_2700
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.500
DVU_2705
Phage uncharacterized protein; Identified by match to protein family HMM TIGR01630.
  
    0.497
DVU_2703
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.486
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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