STRINGSTRING
DVU_2702 DVU_2702 DVU_2703 DVU_2703 DVU_2705 DVU_2705 DVU_2707 DVU_2707 DVU_2704 DVU_2704 DVU_2706 DVU_2706 DVU_2701 DVU_2701 DVU_2698 DVU_2698 DVU_2699 DVU_2699 DVU_2700 DVU_2700 DVU_2694 DVU_2694
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2702Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NM01121. (93 aa)    
Predicted Functional Partners:
DVU_2703
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.791
DVU_2705
Phage uncharacterized protein; Identified by match to protein family HMM TIGR01630.
  
    0.790
DVU_2707
Virion morphogenesis protein; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641.
  
    0.789
DVU_2704
Conserved hypothetical protein; Identified by similarity to OMNI:NMB1092.
  
    0.787
DVU_2706
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NM01730; match to protein family HMM PF06074.
  
    0.782
DVU_2701
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.777
DVU_2698
Lipoprotein, putative.
  
    0.692
DVU_2699
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
  
    0.684
DVU_2700
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.684
DVU_2694
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.502
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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