STRINGSTRING
DVU_2716 DVU_2716 DVU_2711 DVU_2711 DVU_2710 DVU_2710 DVU_2713 DVU_2713 DVU_2715 DVU_2715 DVU_2714 DVU_2714 DVU_2712 DVU_2712 DVU_2722 DVU_2722 DVU_2729 DVU_2729 DVU_2723 DVU_2723 DVU_2721 DVU_2721
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2716Tail sheath protein, putative; Identified by similarity to SP:P79678. (473 aa)    
Predicted Functional Partners:
DVU_2711
Major head subunit, putative; Identified by similarity to SP:Q9T1W1.
 
  
 0.973
DVU_2710
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NM01727.
 
  
 0.972
DVU_2713
Conserved hypothetical protein.
 
  
 0.970
DVU_2715
Conserved hypothetical protein; Identified by similarity to OMNI:NMB1103.
  
  
 0.928
DVU_2714
Conserved hypothetical protein; Identified by similarity to GP:6900380.
  
  
 0.924
DVU_2712
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.899
DVU_2722
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NM01712.
 
    0.836
DVU_2729
Tail protein, putative; Identified by similarity to GP:19483737.
 
  
 0.836
DVU_2723
Tail protein, putative; Identified by similarity to SP:P08558.
 
    0.834
DVU_2721
Phage tail tape measure protein, TP901 family, putative.
 
  
 0.822
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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