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DVU_2721 DVU_2721 DVU_2722 DVU_2722 DVU_2723 DVU_2723 DVU_2724 DVU_2724 DVU_2708 DVU_2708 DVU_2716 DVU_2716 DVU_2713 DVU_2713 DVU_2710 DVU_2710 DVU_2728 DVU_2728 DVU_1114 DVU_1114 DVU_2729 DVU_2729
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
DVU_2721Phage tail tape measure protein, TP901 family, putative. (646 aa)    
Predicted Functional Partners:
DVU_2722
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NM01712.
 
    0.941
DVU_2723
Tail protein, putative; Identified by similarity to SP:P08558.
 
    0.926
DVU_2724
Phage baseplate assembly protein V, putative; Identified by match to protein family HMM TIGR01644.
 
    0.925
DVU_2708
Virion morphogenesis protein; Identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635.
 
    0.831
DVU_2716
Tail sheath protein, putative; Identified by similarity to SP:P79678.
 
  
 0.822
DVU_2713
Conserved hypothetical protein.
 
    0.809
DVU_2710
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NM01727.
 
    0.807
DVU_2728
Tail protein, putative; Identified by similarity to GP:19483757.
 
    0.792
DVU_1114
Virion morphogenesis protein; Identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635.
 
    0.791
DVU_2729
Tail protein, putative; Identified by similarity to GP:19483737.
 
  
 0.786
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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