Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0601 | paaK-3 | DVU_0601 | DVU_2735 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.632 |
| DVU_1612 | paaK-3 | DVU_1612 | DVU_2735 | ACT domain protein; Identified by match to protein family HMM PF01842. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.768 |
| DVU_2736 | paaK-3 | DVU_2736 | DVU_2735 | Hypothetical protein; Identified by Glimmer2; putative. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.522 |
| DVU_3294 | paaK-3 | DVU_3294 | DVU_2735 | Aldehyde dehydrogenase (NADP) family protein; Identified by match to protein family HMM PF00171. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.589 |
| DVU_3294 | putA | DVU_3294 | DVU_3319 | Aldehyde dehydrogenase (NADP) family protein; Identified by match to protein family HMM PF00171. | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.619 |
| paaK-3 | DVU_0601 | DVU_2735 | DVU_0601 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.632 |
| paaK-3 | DVU_1612 | DVU_2735 | DVU_1612 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ACT domain protein; Identified by match to protein family HMM PF01842. | 0.768 |
| paaK-3 | DVU_2736 | DVU_2735 | DVU_2736 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Hypothetical protein; Identified by Glimmer2; putative. | 0.522 |
| paaK-3 | DVU_3294 | DVU_2735 | DVU_3294 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Aldehyde dehydrogenase (NADP) family protein; Identified by match to protein family HMM PF00171. | 0.589 |
| paaK-3 | putA | DVU_2735 | DVU_3319 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.606 |
| putA | DVU_3294 | DVU_3319 | DVU_3294 | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Aldehyde dehydrogenase (NADP) family protein; Identified by match to protein family HMM PF00171. | 0.619 |
| putA | paaK-3 | DVU_3319 | DVU_2735 | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.606 |