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DVU_2781 DVU_2781 DVU_2783 DVU_2783 DVU_2782 DVU_2782 DVU_2784 DVU_2784 DVU_0430 DVU_0430 DVU_0586 DVU_0586
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2781Hypothetical protein; Identified by Glimmer2; putative. (188 aa)    
Predicted Functional Partners:
DVU_2783
Membrane protein, putative; Identified by match to protein family HMM PF01925.
  
    0.554
DVU_2782
Hypothetical protein; Identified by Glimmer2; putative.
       0.553
DVU_2784
Dehydrogenase, FMN-dependent family; Identified by match to protein family HMM PF01070.
       0.553
DVU_0430
Ech hydrogenase, subunit EchE, putative; Identified by similarity to GP:3005971; match to protein family HMM PF00346.
      
 0.511
DVU_0586
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.453
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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