Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0099 | DVU_2806 | DVU_0099 | DVU_2806 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | 0.822 |
| DVU_0099 | DVU_2807 | DVU_0099 | DVU_2807 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.843 |
| DVU_0099 | tolQ-1 | DVU_0099 | DVU_2388 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.821 |
| DVU_0099 | tolQ-2 | DVU_0099 | DVU_3099 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.828 |
| DVU_2263 | DVU_2806 | DVU_2263 | DVU_2806 | Outer membrane autotransporter barrel domain protein; Identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414. | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | 0.732 |
| DVU_2263 | DVU_2807 | DVU_2263 | DVU_2807 | Outer membrane autotransporter barrel domain protein; Identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.772 |
| DVU_2263 | tolQ-1 | DVU_2263 | DVU_2388 | Outer membrane autotransporter barrel domain protein; Identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.736 |
| DVU_2263 | tolQ-2 | DVU_2263 | DVU_3099 | Outer membrane autotransporter barrel domain protein; Identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.734 |
| DVU_2390 | DVU_2806 | DVU_2390 | DVU_2806 | TonB domain protein; Identified by similarity to GP:19577340; match to protein family HMM PF03544; match to protein family HMM TIGR01352. | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | 0.772 |
| DVU_2390 | DVU_2807 | DVU_2390 | DVU_2807 | TonB domain protein; Identified by similarity to GP:19577340; match to protein family HMM PF03544; match to protein family HMM TIGR01352. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.842 |
| DVU_2390 | tolQ-1 | DVU_2390 | DVU_2388 | TonB domain protein; Identified by similarity to GP:19577340; match to protein family HMM PF03544; match to protein family HMM TIGR01352. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.947 |
| DVU_2390 | tolQ-2 | DVU_2390 | DVU_3099 | TonB domain protein; Identified by similarity to GP:19577340; match to protein family HMM PF03544; match to protein family HMM TIGR01352. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.772 |
| DVU_2805 | DVU_2806 | DVU_2805 | DVU_2806 | Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492. | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | 0.800 |
| DVU_2805 | DVU_2807 | DVU_2805 | DVU_2807 | Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.790 |
| DVU_2805 | DVU_2808 | DVU_2805 | DVU_2808 | Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492. | TonB domain protein; Identified by similarity to GP:17982262; match to protein family HMM TIGR01352. | 0.738 |
| DVU_2806 | DVU_0099 | DVU_2806 | DVU_0099 | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.822 |
| DVU_2806 | DVU_2263 | DVU_2806 | DVU_2263 | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | Outer membrane autotransporter barrel domain protein; Identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414. | 0.732 |
| DVU_2806 | DVU_2390 | DVU_2806 | DVU_2390 | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | TonB domain protein; Identified by similarity to GP:19577340; match to protein family HMM PF03544; match to protein family HMM TIGR01352. | 0.772 |
| DVU_2806 | DVU_2805 | DVU_2806 | DVU_2805 | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492. | 0.800 |
| DVU_2806 | DVU_2807 | DVU_2806 | DVU_2807 | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.982 |
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