STRINGSTRING
DVU_2838 DVU_2838 DVU_2839 DVU_2839 DVU_2837 DVU_2837 DVU_2836 DVU_2836
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2838Conserved hypothetical protein; Identified by similarity to OMNI:NTL02ST1547. (445 aa)    
Predicted Functional Partners:
DVU_2839
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01TA00070.
  
   0.944
DVU_2837
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01XC4052; match to protein family HMM PF04313.
  
    0.607
DVU_2836
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.415
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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