STRINGSTRING
Desaf_1923 Desaf_1923 Desaf_1921 Desaf_1921 Desaf_1922 Desaf_1922 Desaf_1920 Desaf_1920 Desaf_1918 Desaf_1918 Desaf_1924 Desaf_1924 Desaf_1915 Desaf_1915 Desaf_1916 Desaf_1916 Desaf_1917 Desaf_1917 Desaf_1919 Desaf_1919 Desaf_0698 Desaf_0698
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_1923PFAM: Tail tube protein, bacteriophage; KEGG: dvu:DVU2858 tail tube protein, putative. (121 aa)    
Predicted Functional Partners:
Desaf_1921
KEGG: dvu:DVU2860 hypothetical protein.
  
    0.923
Desaf_1922
KEGG: pol:Bpro_3741 bacteriophage Mu tail sheath.
  
  
 0.897
Desaf_1920
KEGG: dvu:DVU2861 hypothetical protein.
  
    0.836
Desaf_1918
KEGG: lsp:Bsph_3757 hypothetical protein.
  
    0.830
Desaf_1924
KEGG: dvu:DVU2857 hypothetical protein.
       0.773
Desaf_1915
KEGG: ppu:PP_2269 N-acetylmuramoyl-L-alanine amidase, putative; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: Peptidoglycan recognition protein, metazoa/bacteria; N-acetylmuramoyl-L-alanine amidase, family 2.
       0.746
Desaf_1916
KEGG: dac:Daci_1964 hypothetical protein.
       0.746
Desaf_1917
Hypothetical protein.
       0.746
Desaf_1919
Hypothetical protein.
       0.746
Desaf_0698
KEGG: bacteriophage Mu tail sheath.
  
  
 0.595
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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