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DVU_2885 DVU_2885 DVU_2905 DVU_2905 DVU_2396 DVU_2396 DVU_2280 DVU_2280 glgA glgA putA putA poR poR DVU_2886 DVU_2886 DVU_2825 DVU_2825 DVU_2884 DVU_2884 DVU_2765 DVU_2765
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2885Alcohol dehydrogenase, iron-containing; Identified by similarity to GP:155577; match to protein family HMM PF00465. (397 aa)    
Predicted Functional Partners:
DVU_2905
Alcohol dehydrogenase, iron-containing; Identified by similarity to SP:Q04944; match to protein family HMM PF00465.
  
 
0.929
DVU_2396
Alcohol dehydrogenase, iron-containing; Identified by similarity to SP:P31005; match to protein family HMM PF00465.
  
 
 
0.927
DVU_2280
Amino acid permease family protein; Identified by match to protein family HMM PF00324.
 
 
 0.688
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.613
putA
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
 
 
 0.600
poR
Pyruvate-ferredoxin oxidoreductase; Identified by similarity to GP:1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855.
     
 0.554
DVU_2886
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.
  
  
 0.536
DVU_2825
Pyruvate formate-lyase 1 activating enzyme, putative; Identified by similarity to SP:P09374; similar to SP:Q46267; match to protein family HMM PF00037; match to protein family HMM PF04055.
  
  
 0.515
DVU_2884
Peptidase, M18 family; Identified by match to protein family HMM PF02127.
  
   0.514
DVU_2765
Identified by match to protein family HMM PF00753.
  
 
 0.480
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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