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DVU_2944 DVU_2944 DVU_3227 DVU_3227 DVU_2945 DVU_2945 DVU_3195 DVU_3195 pyrE pyrE purB purB DVU_2896 DVU_2896 DVU_0047 DVU_0047 DVU_0902 DVU_0902 DVU_2077 DVU_2077 DVU_3112 DVU_3112
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2944Identified by match to protein family HMM PF03734. (429 aa)    
Predicted Functional Partners:
DVU_3227
Flagellar basal body-associated protein, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
   0.823
DVU_2945
Conserved domain protein; Identified by similarity to GP:13926258.
       0.707
DVU_3195
Lipoprotein, putative; Identified by similarity to OMNI:NTL01CJ01286.
 
   
 0.687
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
    0.666
purB
Adenylosuccinate lyase; Identified by similarity to SP:P12047; match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
    0.656
DVU_2896
TPR domain protein; Identified by match to protein family HMM PF00515.
 
  
 0.648
DVU_0047
Flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
   0.632
DVU_0902
TPR domain protein; Identified by match to protein family HMM PF00515.
 
    0.624
DVU_2077
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02MA3501; match to protein family HMM PF03130.
  
    0.540
DVU_3112
TPR domain protein; Identified by match to protein family HMM PF00515.
 
    0.539
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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