node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_2106 | DVU_2973 | DVU_2106 | DVU_2973 | Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199. | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | 0.595 |
DVU_2106 | hup-1 | DVU_2106 | DVU_0396 | Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199. | DNA-binding protein HU; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. | 0.602 |
DVU_2973 | DVU_2106 | DVU_2973 | DVU_2106 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199. | 0.595 |
DVU_2973 | DVU_2974 | DVU_2973 | DVU_2974 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | Hypothetical protein; Identified by Glimmer2; putative. | 0.556 |
DVU_2973 | DVU_2975 | DVU_2973 | DVU_2975 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | Hydrolase, putative; Identified by match to protein family HMM PF04307. | 0.560 |
DVU_2973 | cheD | DVU_2973 | DVU_2972 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | Chemotaxis protein CheD, putative; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.673 |
DVU_2973 | csrA | DVU_2973 | DVU_0521 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.585 |
DVU_2973 | hup-1 | DVU_2973 | DVU_0396 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | DNA-binding protein HU; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. | 0.998 |
DVU_2973 | hup-3 | DVU_2973 | DVU_1795 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions; Belongs to the bacterial histone-like protein family. | 0.622 |
DVU_2973 | hup-4 | DVU_2973 | DVU_3187 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.851 |
DVU_2973 | hupB | DVU_2973 | DVU_1134 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | DNA-binding protein HU, beta subunit; Identified by similarity to SP:P02346; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.888 |
DVU_2973 | topA | DVU_2973 | DVU_3389 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.553 |
DVU_2974 | DVU_2973 | DVU_2974 | DVU_2973 | Hypothetical protein; Identified by Glimmer2; putative. | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | 0.556 |
DVU_2974 | DVU_2975 | DVU_2974 | DVU_2975 | Hypothetical protein; Identified by Glimmer2; putative. | Hydrolase, putative; Identified by match to protein family HMM PF04307. | 0.862 |
DVU_2974 | cheD | DVU_2974 | DVU_2972 | Hypothetical protein; Identified by Glimmer2; putative. | Chemotaxis protein CheD, putative; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.494 |
DVU_2975 | DVU_2973 | DVU_2975 | DVU_2973 | Hydrolase, putative; Identified by match to protein family HMM PF04307. | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | 0.560 |
DVU_2975 | DVU_2974 | DVU_2975 | DVU_2974 | Hydrolase, putative; Identified by match to protein family HMM PF04307. | Hypothetical protein; Identified by Glimmer2; putative. | 0.862 |
DVU_2975 | cheD | DVU_2975 | DVU_2972 | Hydrolase, putative; Identified by match to protein family HMM PF04307. | Chemotaxis protein CheD, putative; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.494 |
cheD | DVU_2973 | DVU_2972 | DVU_2973 | Chemotaxis protein CheD, putative; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | 0.673 |
cheD | DVU_2974 | DVU_2972 | DVU_2974 | Chemotaxis protein CheD, putative; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.494 |