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DVU_2978 DVU_2978 psd psd DVU_3133 DVU_3133 ribD ribD DVU_2977 DVU_2977 DVU_2736 DVU_2736 DVU_0759 DVU_0759 pssA pssA ribAB ribAB DVU_2976 DVU_2976 DVU_2611 DVU_2611
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DVU_2978Hydrolase, haloacid dehalogenase-like family; Identified by similarity to OMNI:NTL02EC4785; match to protein family HMM PF00702. (210 aa)    
Predicted Functional Partners:
psd
Phosphatidylserine decarboxylase-related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
 
 0.607
DVU_3133
Glycerol uptake facilitator protein; Identified by similarity to SP:P18156; match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.585
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.515
DVU_2977
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.484
DVU_2736
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.478
DVU_0759
Peptidase, M29 family; Identified by match to protein family HMM PF02073.
 
    0.447
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.446
ribAB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.432
DVU_2976
Conserved hypothetical protein; Identified by similarity to OMNI:NT01MC0831; match to protein family HMM PF04463.
  
    0.418
DVU_2611
Conserved hypothetical protein.
  
    0.410
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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