Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| DVU_0665 | DVU_3003 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.546 |
| DVU_0665 | DVU_3004 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.541 |
| DVU_0665 | DVU_3007 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.526 |
| DVU_0665 | DVU_3009 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.549 |
| DVU_3003 | DVU_0665 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | 0.546 |
| DVU_3003 | DVU_3004 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.716 |
| DVU_3003 | DVU_3005 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.510 |
| DVU_3003 | DVU_3006 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Polysaccharide biosynthesis protein/methyltransferase, putative; Identified by similarity to SP:P39626; similar to GP:10179847; match to protein family HMM PF02348. | 0.504 |
| DVU_3003 | DVU_3007 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Hypothetical protein; Identified by Glimmer2; putative. | 0.530 |
| DVU_3003 | DVU_3008 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Identified by match to protein family HMM PF03102. | 0.519 |
| DVU_3003 | DVU_3009 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.879 |
| DVU_3003 | DVU_3010 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by similarity to GP:22095313; match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.520 |
| DVU_3003 | DVU_3011 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Conserved hypothetical protein; Identified by similarity to OMNI:CC2858. | 0.698 |
| DVU_3004 | DVU_0665 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | 0.541 |
| DVU_3004 | DVU_3003 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.716 |
| DVU_3004 | DVU_3005 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.842 |
| DVU_3004 | DVU_3006 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Polysaccharide biosynthesis protein/methyltransferase, putative; Identified by similarity to SP:P39626; similar to GP:10179847; match to protein family HMM PF02348. | 0.773 |
| DVU_3004 | DVU_3007 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Hypothetical protein; Identified by Glimmer2; putative. | 0.772 |
| DVU_3004 | DVU_3008 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Identified by match to protein family HMM PF03102. | 0.900 |
| DVU_3004 | DVU_3009 | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.824 |
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