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DVU_3046 DVU_3046 DVU_1061 DVU_1061 DVU_1060 DVU_1060 glgB glgB DVU_0938 DVU_0938 ugd ugd acpP acpP rfbC rfbC DVU_0346 DVU_0346 rfbB rfbB DVU_1879 DVU_1879
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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DVU_3046Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. (368 aa)    
Predicted Functional Partners:
DVU_1061
Identified by similarity to SP:P71243; match to protein family HMM PF00534.
  
    0.591
DVU_1060
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
    0.559
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.557
DVU_0938
Isoamylase N-terminal domain protein.
   
 0.554
ugd
UDP-glucose 6-dehydrogenase; Identified by similarity to SP:O54068; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.506
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.499
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.497
DVU_0346
Membrane protein, putative.
  
  
 0.496
rfbB
dTDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF01370; match to protein family HMM TIGR01181; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.488
DVU_1879
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
     0.481
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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