Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0100 | DVU_3101 | DVU_0100 | DVU_3101 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | tonB protein, putative; Identified by similarity to GP:14595286; match to protein family HMM TIGR01352. | 0.766 |
| DVU_0100 | DVU_3102 | DVU_0100 | DVU_3102 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | Hypothetical protein; Identified by Glimmer2; putative. | 0.718 |
| DVU_0100 | tolB | DVU_0100 | DVU_3103 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | tolB protein, putative; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.604 |
| DVU_2383 | DVU_2389 | DVU_2383 | DVU_2389 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.831 |
| DVU_2383 | DVU_2806 | DVU_2383 | DVU_2806 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | 0.504 |
| DVU_2383 | DVU_2807 | DVU_2383 | DVU_2807 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.561 |
| DVU_2383 | DVU_3100 | DVU_2383 | DVU_3100 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.558 |
| DVU_2383 | DVU_3101 | DVU_2383 | DVU_3101 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | tonB protein, putative; Identified by similarity to GP:14595286; match to protein family HMM TIGR01352. | 0.882 |
| DVU_2383 | DVU_3102 | DVU_2383 | DVU_3102 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | Hypothetical protein; Identified by Glimmer2; putative. | 0.865 |
| DVU_2383 | tolQ-1 | DVU_2383 | DVU_2388 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.804 |
| DVU_2383 | tolQ-2 | DVU_2383 | DVU_3099 | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.500 |
| DVU_2389 | DVU_2383 | DVU_2389 | DVU_2383 | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | 0.831 |
| DVU_2389 | DVU_2806 | DVU_2389 | DVU_2806 | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | 0.902 |
| DVU_2389 | DVU_3101 | DVU_2389 | DVU_3101 | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | tonB protein, putative; Identified by similarity to GP:14595286; match to protein family HMM TIGR01352. | 0.865 |
| DVU_2389 | DVU_3102 | DVU_2389 | DVU_3102 | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | Hypothetical protein; Identified by Glimmer2; putative. | 0.770 |
| DVU_2389 | tolB | DVU_2389 | DVU_3103 | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | tolB protein, putative; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.698 |
| DVU_2389 | tolQ-1 | DVU_2389 | DVU_2388 | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.992 |
| DVU_2389 | tolQ-2 | DVU_2389 | DVU_3099 | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. | 0.967 |
| DVU_2806 | DVU_2383 | DVU_2806 | DVU_2383 | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593. | 0.504 |
| DVU_2806 | DVU_2389 | DVU_2806 | DVU_2389 | MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618. | Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472. | 0.902 |
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