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DVU_3157 DVU_3157 DVU_3158 DVU_3158 DVU_2043 DVU_2043 DVU_1242 DVU_1242 DVU_2037 DVU_2037 DVU_3254 DVU_3254 glmS glmS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
DVU_3157Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA03238. (480 aa)    
Predicted Functional Partners:
DVU_3158
vacJ lipoprotein, putative; Identified by match to protein family HMM PF04333.
    0.959
DVU_2043
Conserved hypothetical protein; Identified by similarity to GP:20095140.
  
     0.653
DVU_1242
vacJ lipoprotein, putative; Identified by similarity to SP:P76506; match to protein family HMM PF04333.
     0.462
DVU_2037
cobS protein, putative; Identified by similarity to SP:P29933.
  
     0.452
DVU_3254
PDZ domain protein; Identified by match to protein family HMM PF00595.
   
    0.450
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.409
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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