node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_0462 | DVU_1864 | DVU_0462 | DVU_1864 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP:P08821; match to protein family HMM PF00216. | 0.509 |
DVU_0462 | DVU_2973 | DVU_0462 | DVU_2973 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | 0.507 |
DVU_0462 | hup-1 | DVU_0462 | DVU_0396 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | DNA-binding protein HU; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. | 0.511 |
DVU_0462 | hup-4 | DVU_0462 | DVU_3187 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.517 |
DVU_0462 | rpsO | DVU_0462 | DVU_0504 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.742 |
DVU_0462 | rpsT | DVU_0462 | DVU_1896 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.502 |
DVU_1422 | hup-4 | DVU_1422 | DVU_3187 | Identified by match to protein family HMM PF00691. | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.752 |
DVU_1422 | rbO | DVU_1422 | DVU_3183 | Identified by match to protein family HMM PF00691. | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | 0.841 |
DVU_1422 | rpsO | DVU_1422 | DVU_0504 | Identified by match to protein family HMM PF00691. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.525 |
DVU_1422 | rpsT | DVU_1422 | DVU_1896 | Identified by match to protein family HMM PF00691. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.522 |
DVU_1864 | DVU_0462 | DVU_1864 | DVU_0462 | DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP:P08821; match to protein family HMM PF00216. | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | 0.509 |
DVU_1864 | hup-1 | DVU_1864 | DVU_0396 | DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP:P08821; match to protein family HMM PF00216. | DNA-binding protein HU; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. | 0.819 |
DVU_1864 | hup-4 | DVU_1864 | DVU_3187 | DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP:P08821; match to protein family HMM PF00216. | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.816 |
DVU_1864 | rpsO | DVU_1864 | DVU_0504 | DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP:P08821; match to protein family HMM PF00216. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.529 |
DVU_1864 | rpsT | DVU_1864 | DVU_1896 | DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP:P08821; match to protein family HMM PF00216. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.624 |
DVU_1864 | topA | DVU_1864 | DVU_3389 | DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP:P08821; match to protein family HMM PF00216. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.557 |
DVU_2973 | DVU_0462 | DVU_2973 | DVU_0462 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807. | 0.507 |
DVU_2973 | hup-1 | DVU_2973 | DVU_0396 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | DNA-binding protein HU; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. | 0.998 |
DVU_2973 | hup-4 | DVU_2973 | DVU_3187 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.851 |
DVU_2973 | rpsO | DVU_2973 | DVU_0504 | Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.500 |