STRINGSTRING
DVU_3196 DVU_3196 DVU_3195 DVU_3195 DVU_0949 DVU_0949 DVU_2611 DVU_2611 DVU_1724 DVU_1724 DVU_1339 DVU_1339 ilvE ilvE DVU_0760 DVU_0760 DVU_1338 DVU_1338
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_3196Twin-arginine translocation pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409. (383 aa)    
Predicted Functional Partners:
DVU_3195
Lipoprotein, putative; Identified by similarity to OMNI:NTL01CJ01286.
 
    0.910
DVU_0949
Conserved domain protein; Identified by similarity to OMNI:NMB1475.
  
     0.531
DVU_2611
Conserved hypothetical protein.
  
    0.522
DVU_1724
Phage uncharacterized protein, putative.
  
    0.485
DVU_1339
Lipoprotein, putative.
  
    0.447
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
     
 0.433
DVU_0760
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.422
DVU_1338
Conserved hypothetical protein; Identified by similarity to OMNI:SO3257.
  
    0.404
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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