Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0133 | DVU_0143 | DVU_0133 | DVU_0143 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | 0.623 |
| DVU_0133 | DVU_0770 | DVU_0133 | DVU_0770 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.594 |
| DVU_0133 | DVU_3299 | DVU_0133 | DVU_3299 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.786 |
| DVU_0133 | aprB | DVU_0133 | DVU_0846 | Hypothetical protein; Identified by Glimmer2; putative. | Adenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. | 0.412 |
| DVU_0143 | DVU_0133 | DVU_0143 | DVU_0133 | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | Hypothetical protein; Identified by Glimmer2; putative. | 0.623 |
| DVU_0143 | DVU_0770 | DVU_0143 | DVU_0770 | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.641 |
| DVU_0143 | DVU_0849 | DVU_0143 | DVU_0849 | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | 0.784 |
| DVU_0143 | DVU_3299 | DVU_0143 | DVU_3299 | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.684 |
| DVU_0143 | aprA | DVU_0143 | DVU_0847 | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | Adenylyl-sulphate reductase, alpha subunit; Identified by similarity to GP:7109235; match to protein family HMM TIGR02061. | 0.773 |
| DVU_0143 | aprB | DVU_0143 | DVU_0846 | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | Adenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. | 0.773 |
| DVU_0143 | dsvA | DVU_0143 | DVU_0402 | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | Dissimilatory sulfite reductase alpha subunit; Part of the complex that catalyzes the reduction of sulfite to sulfide. The alpha and beta subunits may have arisen by gene duplication. They both bind 2 iron-sulfur clusters, but the alpha subunit seems to be catalytically inactive, due to substitutions along the putative substrate access channel, and because it binds sirohydrochlorin (the dematallated form of siroheme) instead of siroheme. | 0.685 |
| DVU_0770 | DVU_0133 | DVU_0770 | DVU_0133 | Membrane protein, putative; Identified by match to protein family HMM PF01925. | Hypothetical protein; Identified by Glimmer2; putative. | 0.594 |
| DVU_0770 | DVU_0143 | DVU_0770 | DVU_0143 | Membrane protein, putative; Identified by match to protein family HMM PF01925. | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | 0.641 |
| DVU_0770 | DVU_0849 | DVU_0770 | DVU_0849 | Membrane protein, putative; Identified by match to protein family HMM PF01925. | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | 0.579 |
| DVU_0770 | DVU_3299 | DVU_0770 | DVU_3299 | Membrane protein, putative; Identified by match to protein family HMM PF01925. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.700 |
| DVU_0770 | aprA | DVU_0770 | DVU_0847 | Membrane protein, putative; Identified by match to protein family HMM PF01925. | Adenylyl-sulphate reductase, alpha subunit; Identified by similarity to GP:7109235; match to protein family HMM TIGR02061. | 0.569 |
| DVU_0770 | aprB | DVU_0770 | DVU_0846 | Membrane protein, putative; Identified by match to protein family HMM PF01925. | Adenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. | 0.669 |
| DVU_0770 | dsvA | DVU_0770 | DVU_0402 | Membrane protein, putative; Identified by match to protein family HMM PF01925. | Dissimilatory sulfite reductase alpha subunit; Part of the complex that catalyzes the reduction of sulfite to sulfide. The alpha and beta subunits may have arisen by gene duplication. They both bind 2 iron-sulfur clusters, but the alpha subunit seems to be catalytically inactive, due to substitutions along the putative substrate access channel, and because it binds sirohydrochlorin (the dematallated form of siroheme) instead of siroheme. | 0.553 |
| DVU_0849 | DVU_0143 | DVU_0849 | DVU_0143 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. | 0.784 |
| DVU_0849 | DVU_0770 | DVU_0849 | DVU_0770 | Heterodisulfide reductase, iron-sulfur-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF02662. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.579 |
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