node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_0449 | DVU_1431 | DVU_0449 | DVU_1431 | Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Hpt domain protein/STAS domain protein; Identified by match to protein family HMM PF01627; match to protein family HMM PF01740. | 0.997 |
DVU_0449 | DVU_3303 | DVU_0449 | DVU_3303 | Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | 0.807 |
DVU_0449 | fliM | DVU_0449 | DVU_0910 | Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Flagellar motor switch protein FliM; Identified by similarity to SP:P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397. | 0.991 |
DVU_0449 | groEL | DVU_0449 | DVU_1976 | Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Chaperonin, 60 kDa; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.638 |
DVU_0449 | grpE | DVU_0449 | DVU_0812 | Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.586 |
DVU_1431 | DVU_0449 | DVU_1431 | DVU_0449 | Hpt domain protein/STAS domain protein; Identified by match to protein family HMM PF01627; match to protein family HMM PF01740. | Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
DVU_1431 | DVU_3303 | DVU_1431 | DVU_3303 | Hpt domain protein/STAS domain protein; Identified by match to protein family HMM PF01627; match to protein family HMM PF01740. | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | 0.750 |
DVU_1431 | fliM | DVU_1431 | DVU_0910 | Hpt domain protein/STAS domain protein; Identified by match to protein family HMM PF01627; match to protein family HMM PF01740. | Flagellar motor switch protein FliM; Identified by similarity to SP:P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397. | 0.937 |
DVU_3302 | DVU_3303 | DVU_3302 | DVU_3303 | Hypothetical protein; Identified by Glimmer2; putative. | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | 0.713 |
DVU_3303 | DVU_0449 | DVU_3303 | DVU_0449 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.807 |
DVU_3303 | DVU_1431 | DVU_3303 | DVU_1431 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | Hpt domain protein/STAS domain protein; Identified by match to protein family HMM PF01627; match to protein family HMM PF01740. | 0.750 |
DVU_3303 | DVU_3302 | DVU_3303 | DVU_3302 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | Hypothetical protein; Identified by Glimmer2; putative. | 0.713 |
DVU_3303 | clpA | DVU_3303 | DVU_1602 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | ATP-dependent Clp protease, ATP-binding subunit ClpA; Identified by similarity to SP:P15716; match to protein family HMM PF00004; match to protein family HMM PF02861; Belongs to the ClpA/ClpB family. | 0.810 |
DVU_3303 | clpB | DVU_3303 | DVU_1874 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | ATP-dependent Clp protease, ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK (By similarity). Belongs to [...] | 0.810 |
DVU_3303 | fliM | DVU_3303 | DVU_0910 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | Flagellar motor switch protein FliM; Identified by similarity to SP:P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397. | 0.817 |
DVU_3303 | groEL | DVU_3303 | DVU_1976 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | Chaperonin, 60 kDa; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.740 |
DVU_3303 | grpE | DVU_3303 | DVU_0812 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.708 |
DVU_3303 | hslU | DVU_3303 | DVU_1467 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.754 |
DVU_3303 | hslV | DVU_3303 | DVU_1577 | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.713 |
clpA | DVU_3303 | DVU_1602 | DVU_3303 | ATP-dependent Clp protease, ATP-binding subunit ClpA; Identified by similarity to SP:P15716; match to protein family HMM PF00004; match to protein family HMM PF02861; Belongs to the ClpA/ClpB family. | ATP-dependent protease La, truncation; Identified by match to protein family HMM PF00004; match to protein family HMM PF00072; match to protein family HMM PF05362. | 0.810 |