Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_3320 | DVU_3321 | Conserved domain protein; Identified by similarity to OMNI:NTL01YP2009. | Hypothetical protein; Identified by Glimmer2; putative. | 0.779 |
DVU_3320 | DVU_3322 | Conserved domain protein; Identified by similarity to OMNI:NTL01YP2009. | Conserved domain protein; Identified by similarity to OMNI:NTL01FN1931. | 0.526 |
DVU_3320 | DVU_3323 | Conserved domain protein; Identified by similarity to OMNI:NTL01YP2009. | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.530 |
DVU_3321 | DVU_3320 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved domain protein; Identified by similarity to OMNI:NTL01YP2009. | 0.779 |
DVU_3321 | DVU_3322 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved domain protein; Identified by similarity to OMNI:NTL01FN1931. | 0.520 |
DVU_3321 | DVU_3323 | Hypothetical protein; Identified by Glimmer2; putative. | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.530 |
DVU_3322 | DVU_3320 | Conserved domain protein; Identified by similarity to OMNI:NTL01FN1931. | Conserved domain protein; Identified by similarity to OMNI:NTL01YP2009. | 0.526 |
DVU_3322 | DVU_3321 | Conserved domain protein; Identified by similarity to OMNI:NTL01FN1931. | Hypothetical protein; Identified by Glimmer2; putative. | 0.520 |
DVU_3322 | DVU_3323 | Conserved domain protein; Identified by similarity to OMNI:NTL01FN1931. | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.969 |
DVU_3323 | DVU_3320 | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Conserved domain protein; Identified by similarity to OMNI:NTL01YP2009. | 0.530 |
DVU_3323 | DVU_3321 | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Hypothetical protein; Identified by Glimmer2; putative. | 0.530 |
DVU_3323 | DVU_3322 | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Conserved domain protein; Identified by similarity to OMNI:NTL01FN1931. | 0.969 |