STRINGSTRING
DVU_3341 DVU_3341 DVU_3342 DVU_3342 DVU_3344 DVU_3344 DVU_3343 DVU_3343 DVU_3345 DVU_3345 DVU_3346 DVU_3346
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3341Hypothetical protein; Identified by Glimmer2; putative. (37 aa)    
Predicted Functional Partners:
DVU_3342
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.587
DVU_3344
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.581
DVU_3343
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.573
DVU_3345
Hypothetical protein; Identified by Glimmer2; putative.
       0.504
DVU_3346
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.462
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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