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DVU_3359 DVU_3359 DVU_3360 DVU_3360 DVU_3361 DVU_3361 DVU_2370 DVU_2370 DVU_3362 DVU_3362
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
DVU_3359Hypothetical protein; Identified by Glimmer2; putative. (139 aa)    
Predicted Functional Partners:
DVU_3360
Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family.
  
    0.611
DVU_3361
ADP-heptose synthase, putative; Identified by similarity to GP:882153; match to protein family HMM PF00294.
       0.593
DVU_2370
Outer membrane protein OmpH, putative; Identified by similarity to SP:P31519; match to protein family HMM PF03938.
   
   0.441
DVU_3362
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01BH0861.
  
    0.402
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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