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DVU_3387 DVU_3387 flgI flgI fliE fliE flgH flgH DVU_3003 DVU_3003 fliM fliM DVU_3388 DVU_3388 DVU_2619 DVU_2619 DVU_3019 DVU_3019 flgG flgG fliF fliF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_3387Hypothetical protein; Identified by Glimmer2; putative. (337 aa)    
Predicted Functional Partners:
flgI
Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.840
fliE
Flagellar basal body component FliE; Identified by similarity to SP:P24502; match to protein family HMM PF02049; match to protein family HMM TIGR00205.
   
   0.762
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.761
DVU_3003
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
   
    0.727
fliM
Flagellar motor switch protein FliM; Identified by similarity to SP:P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397.
   
 
 0.503
DVU_3388
Lipoprotein, putative; Identified by match to protein family HMM PF01435.
  
    0.472
DVU_2619
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP2311.
   
   0.446
DVU_3019
Radical SAM/B12 binding domain protein; Identified by similarity to SP:O58549; match to protein family HMM PF02310; match to protein family HMM PF04055.
  
    0.439
flgG
Flagellar basal-body rod protein FlgG; Identified by similarity to SP:P16439; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family.
   
 
 0.431
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
    0.418
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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