STRINGSTRING
Sfum_1961 Sfum_1961 Sfum_1012 Sfum_1012 Sfum_1015 Sfum_1015 nifH nifH Sfum_1016 Sfum_1016 Sfum_1013 Sfum_1013 Sfum_1960 Sfum_1960 Sfum_0727 Sfum_0727 Sfum_3698 Sfum_3698 Sfum_1959 Sfum_1959 Sfum_1962 Sfum_1962
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
Sfum_1961PFAM: Radical SAM domain protein; KEGG: dvu:DVUA0007 nitrogenase cofactor biosynthesis protein NifB. (293 aa)    
Predicted Functional Partners:
Sfum_1012
Nitrogenase; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: dvu:DVUA0008 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN, putative; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.992
Sfum_1015
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.992
nifH
Nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
 
  
 0.959
Sfum_1016
KEGG: plt:Plut_1531 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1.
 
  
 0.958
Sfum_1013
KEGG: dvu:DVUA0009 nitrogenase MoFe cofactor biosynthesis protein NifE domain protein; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.933
Sfum_1960
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: ppr:PBPRB0648 putative ferredoxin-type protein.
  
  
 0.822
Sfum_0727
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mta:Moth_0192 ammonium transporter.
  
  
 0.807
Sfum_3698
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.785
Sfum_1959
KEGG: mmp:MMP0975 possible molybdenum ABC transporter, solute-binding protein.
 
  
 0.755
Sfum_1962
Signal peptide peptidase A. Serine peptidase. MEROPS family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: dde:Dde_1442 signal peptide peptidase SppA, 36K type.
       0.566
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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