STRINGSTRING
Ppro_2470 Ppro_2470 Ppro_2469 Ppro_2469 Ppro_2468 Ppro_2468 Ppro_2471 Ppro_2471 Ppro_2474 Ppro_2474 Ppro_2466 Ppro_2466 Ppro_2455 Ppro_2455 Ppro_2865 Ppro_2865 Ppro_2465 Ppro_2465 Ppro_2443 Ppro_2443 Ppro_2873 Ppro_2873
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppro_2470PFAM: polysaccharide deacetylase; KEGG: dvu:DVUA0043 polysaccharide deacetylase family protein. (301 aa)    
Predicted Functional Partners:
Ppro_2469
KEGG: dvu:DVUA0044 hypothetical protein.
 
   
 0.953
Ppro_2468
KEGG: nmu:Nmul_A2522 glycosyl transferase, group 1.
 
    0.936
Ppro_2471
KEGG: gsu:GSU1981 hypothetical protein.
 
     0.907
Ppro_2474
PFAM: lipopolysaccharide biosynthesis; KEGG: gsu:GSU1984 polysaccharide chain length determinant protein, putative.
 
     0.859
Ppro_2466
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: dar:Daro_2408 asparagine synthase, glutamine-hydrolyzing.
 
     0.837
Ppro_2455
PFAM: O-antigen polymerase; KEGG: noc:Noc_1955 O-antigen polymerase.
 
   
 0.821
Ppro_2865
KEGG: pfu:PF0797 hypothetical protein.
 
     0.801
Ppro_2465
Hypothetical protein.
 
   
 0.800
Ppro_2443
TIGRFAM: eight transmembrane protein EpsH; KEGG: dde:Dde_0847 hypothetical protein.
 
     0.791
Ppro_2873
KEGG: pfu:PF0797 hypothetical protein.
 
   
 0.781
Your Current Organism:
Pelobacter propionicus
NCBI taxonomy Id: 338966
Other names: P. propionicus DSM 2379, Pelobacter propionicus DSM 2379, Pelobacter propionicus str. DSM 2379, Pelobacter propionicus strain DSM 2379
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