STRINGSTRING
Dbac_2211 Dbac_2211 Dbac_2212 Dbac_2212 Dbac_2202 Dbac_2202 Dbac_2203 Dbac_2203 Dbac_3291 Dbac_3291 Dbac_2209 Dbac_2209 Dbac_1698 Dbac_1698 Dbac_2215 Dbac_2215 Dbac_2214 Dbac_2214 Dbac_2218 Dbac_2218 Dbac_1339 Dbac_1339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_2211PFAM: polysaccharide biosynthesis protein; KEGG: dvu:DVUA0049 polysaccharide biosynthesis family protein. (494 aa)    
Predicted Functional Partners:
Dbac_2212
PFAM: O-antigen polymerase; KEGG: dvu:DVUA0048 exopolysaccharide production protein, putative.
 
  
 0.944
Dbac_2202
Hypothetical protein; KEGG: pmi:PMT9312_1324 asparagine synthase (glutamine-hydrolysing).
 
     0.847
Dbac_2203
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: dvu:DVUA0058 BNR/Asp-box repeat-containing protein.
 
     0.833
Dbac_3291
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mfa:Mfla_2028 sugar transferase.
 
  
 0.798
Dbac_2209
PFAM: glycosyl transferase group 1; KEGG: dvu:DVUA0051 glycosyl transferase, group 1 family protein.
 
    0.774
Dbac_1698
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: tcx:Tcr_1675 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.772
Dbac_2215
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvu:DVUA0045 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.771
Dbac_2214
PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_3063 glycosyl transferase family protein.
 
  
 0.766
Dbac_2218
TIGRFAM: PEP-CTERM system associated protein; KEGG: dde:Dde_0834 putative lipoprotein.
 
     0.762
Dbac_1339
PFAM: Hemolysin-type calcium-binding region; KEGG: dol:Dole_0612 hemolysin-type calcium-binding region.
  
     0.754
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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