STRINGSTRING
Dbac_2209 Dbac_2209 Dbac_2210 Dbac_2210 Dbac_2208 Dbac_2208 Dbac_2212 Dbac_2212 Dbac_2211 Dbac_2211 Dbac_2206 Dbac_2206 Dbac_2203 Dbac_2203 Dbac_2204 Dbac_2204 Dbac_2207 Dbac_2207 Dbac_2205 Dbac_2205 Dbac_2215 Dbac_2215
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_2209PFAM: glycosyl transferase group 1; KEGG: dvu:DVUA0051 glycosyl transferase, group 1 family protein. (379 aa)    
Predicted Functional Partners:
Dbac_2210
KEGG: dvl:Dvul_3059 glycosyl transferase, group 1.
 
     0.823
Dbac_2208
Acetyltransferase; KEGG: dvl:Dvul_3057 acetyltransferase.
 
    0.818
Dbac_2212
PFAM: O-antigen polymerase; KEGG: dvu:DVUA0048 exopolysaccharide production protein, putative.
 
    0.801
Dbac_2211
PFAM: polysaccharide biosynthesis protein; KEGG: dvu:DVUA0049 polysaccharide biosynthesis family protein.
 
    0.774
Dbac_2206
PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_3055 glycosyl transferase, group 1.
 
    
0.723
Dbac_2203
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: dvu:DVUA0058 BNR/Asp-box repeat-containing protein.
 
     0.706
Dbac_2204
PFAM: polysaccharide deacetylase; KEGG: sil:SPO1535 polysaccharide deacetylase domain- containing protein.
 
    0.699
Dbac_2207
PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_3056 hexapaptide repeat-containing transferase.
 
    0.664
Dbac_2205
Coenzyme F390 synthetase-like protein; KEGG: dvl:Dvul_3044 hypothetical protein.
 
     0.659
Dbac_2215
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvu:DVUA0045 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.646
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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