STRINGSTRING
Kfla_5414 Kfla_5414 Kfla_5415 Kfla_5415 Kfla_5416 Kfla_5416 Kfla_5417 Kfla_5417 Kfla_5418 Kfla_5418 Kfla_5412 Kfla_5412 pyrG pyrG Kfla_6671 Kfla_6671 Kfla_5101 Kfla_5101 Kfla_0195 Kfla_0195 glgB glgB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5414PFAM: glycosyl transferase group 1; KEGG: dvu:DVUA0054 glycosyl transferase, group 1 family protein. (341 aa)    
Predicted Functional Partners:
Kfla_5415
PFAM: virulence factor MVIN family protein; KEGG: bpa:BPP2558 integral membrane protein.
     0.928
Kfla_5416
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
 
  
 0.917
Kfla_5417
Hypothetical protein.
 
     0.885
Kfla_5418
PFAM: Thiamin pyrophosphokinase catalytic region.
 
     0.869
Kfla_5412
PFAM: NUDIX hydrolase; KEGG: cvi:CV_1787 ADPribose diphosphatase.
  
    0.726
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
    0.722
Kfla_6671
Hypothetical protein; KEGG: xca:xccb100_0313 MFS efflux pump.
 
     0.673
Kfla_5101
Hypothetical protein.
  
     0.660
Kfla_0195
PFAM: glycosyl transferase family 2; KEGG: rsh:Rsph17029_0824 glycosyl transferase family protein.
 
  
 0.649
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.625
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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