STRINGSTRING
Tcr_0471 Tcr_0471 Tcr_1003 Tcr_1003 Tcr_0470 Tcr_0470 Tcr_0469 Tcr_0469 Tcr_0468 Tcr_0468 Tcr_0467 Tcr_0467 Tcr_2068 Tcr_2068 Tcr_0166 Tcr_0166 Tcr_1383 Tcr_1383 Tcr_0226 Tcr_0226 Tcr_1483 Tcr_1483
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_0471Conserved hypothetical protein with an ATP-binding domain; PFAM: ATP-binding region, ATPase-like; KEGG: dvu:DVUA0065 sensor histidine kinase. (355 aa)    
Predicted Functional Partners:
Tcr_1003
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment FAD-dependent pyridine nucleotide-disulphide oxidoreductase pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bbr:BB2538 dihydrolipoamide dehydrogenase.
    
 0.951
Tcr_0470
Two component transcriptional regulator, Fis family; TIGRFAM: Helix-turn-helix, Fis-type; PFAM: response regulator receiver; KEGG: dvu:DVUA0057 sigma-54 dependent transcriptional regulator/response regulator.
 
 
   0.873
Tcr_0469
Hypothetical protein; KEGG: sil:SPO1617 type I secretion target repeat protein.
 
     0.812
Tcr_0468
Hypothetical protein; PFAM: methylation site.
 
     0.794
Tcr_0467
Hypothetical protein.
       0.766
Tcr_2068
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 response regulator receiver GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: gka:GK1468 hypothetical protein.
   
 
 0.761
Tcr_0166
TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiver; KEGG: gsu:GSU1037 sensory box/response regulator.
  
 
 0.752
Tcr_1383
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like Hpt; KEGG: bba:Bd3528 signal transduction histidine kinase.
  
 
 0.749
Tcr_0226
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS domain containing protein+B6621 response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like; KEGG: sme:SMa1142 FixL-related histidine kinase.
   
 
 0.721
Tcr_1483
KEGG: syn:slr1753 hypothetical protein.
 
 
 0.655
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.