STRINGSTRING
Acid_3568 Acid_3568 Acid_0556 Acid_0556 Acid_4413 Acid_4413 Acid_4641 Acid_4641 Acid_6943 Acid_6943 Acid_7435 Acid_7435 Acid_1392 Acid_1392 Acid_6618 Acid_6618 Acid_6947 Acid_6947 Acid_6944 Acid_6944 Acid_4342 Acid_4342
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_3568PFAM: ABC-2 type transporter; KEGG: dvu:DVUA0077 ABC transporter, permease protein. (266 aa)    
Predicted Functional Partners:
Acid_0556
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syf:Synpcc7942_1244 ATPase.
 
 0.987
Acid_4413
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syf:Synpcc7942_1244 ATPase.
 
 0.987
Acid_4641
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1505 ABC transporter, ATP-binding protein.
 
 0.987
Acid_6943
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_4065 ABC transporter-like.
 
 0.987
Acid_7435
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_B0028 ABC transporter related.
 
 0.987
Acid_1392
SMART: AAA ATPase; KEGG: syf:Synpcc7942_1244 ATPase.
 
 
 0.941
Acid_6618
PFAM: lipopolysaccharide biosynthesis; KEGG: mca:MCA0149 chain length determinant protein.
  
  
 0.771
Acid_6947
PFAM: glycosyl transferase, family 2; KEGG: bcn:Bcen_0288 glycosyl transferase, family 2.
 
  
 0.729
Acid_6944
PFAM: ABC-2 type transporter; KEGG: pfo:Pfl_4064 ABC-2.
  
     0.708
Acid_4342
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: xac:XAC3110 glycosyltransferase.
 
  
 0.590
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (30%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.