STRINGSTRING
Meso_0107 Meso_0107 Meso_0106 Meso_0106 Meso_0113 Meso_0113 Meso_0110 Meso_0110 Meso_0600 Meso_0600 Meso_0305 Meso_0305 Meso_0109 Meso_0109 Meso_0306 Meso_0306 flhA flhA Meso_0297 Meso_0297 fliP fliP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Meso_0107KEGG: dvu:DVUA0119 type III secretion system ATPase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region H+-transporting two-sector ATPase, alpha/beta subunit-like; SMART: ATPase. (429 aa)    
Predicted Functional Partners:
Meso_0106
Hypothetical protein.
  
 
 0.985
Meso_0113
PFAM: type III secretion exporter; KEGG: yps:pYV0074 putative type III secretion protein.
 
 
 0.971
Meso_0110
TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein; KEGG: plu:plu3771 type III secretion component protein SctR.
 
  
 0.967
Meso_0600
CheA signal transduction histidine kinase; PFAM: response regulator receiver CheW-like protein ATP-binding region, ATPase-like Hpt; KEGG: sme:SMa1558 putative histidine kinase, chemotaxis.
 
  
 0.961
Meso_0305
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 
 0.954
Meso_0109
PFAM: surface presentation of antigens (SPOA) protein; KEGG: cvi:CV2625 surface presentation of antigens; secretory proteins.
  
 
 0.952
Meso_0306
PFAM: flagellar motor switch protein FliG; KEGG: mlo:mll2901 flagellar motor switch protein FliG.
 
 
 0.950
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
 
 0.944
Meso_0297
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078-like; KEGG: mlo:mlr2912 flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.944
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.939
Your Current Organism:
Chelativorans sp. BNC1
NCBI taxonomy Id: 266779
Other names: C. sp. BNC1, Mesorhizobium sp. BNC1
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