STRINGSTRING
Dde_0385 Dde_0385 Dde_3584 Dde_3584 Dde_1713 Dde_1713 Dde_3157 Dde_3157 Dde_0351 Dde_0351 Dde_2705 Dde_2705 Dde_0638 Dde_0638 Dde_2706 Dde_2706 Dde_3152 Dde_3152 Dde_0381 Dde_0381 Dde_1700 Dde_1700
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_0385Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (250 aa)    
Predicted Functional Partners:
Dde_3584
KEGG: dvm:DvMF_2214 flagellar biosynthesis protein FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO.
 
 
 0.967
Dde_1713
PFAM: Flagellar hook-length control protein; KEGG: dvm:DvMF_0248 flagellar hook-length control protein.
 
  
 0.961
Dde_3157
KEGG: dvm:DvMF_2519 flagella basal body P-ring formation protein FlgA; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain.
 
  
 0.961
Dde_0351
KEGG: dvl:Dvul_2670 flagellar assembly protein FliH.
 
  
 0.960
Dde_2705
TIGRFAM: Flagellar export FliJ; KEGG: dvm:DvMF_1393 flagellar export protein FliJ.
 
  
 0.960
Dde_0638
PFAM: Anti-sigma-28 factor, FlgM; KEGG: dvm:DvMF_2585 anti-sigma-28 factor, FlgM.
 
  
 0.957
Dde_2706
KEGG: dvl:Dvul_2072 hypothetical protein.
 
 
 0.956
Dde_3152
KEGG: dvm:DvMF_2524 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family.
 
  
 0.954
Dde_0381
PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: dvm:DvMF_2013 flagellar biosynthesis protein FlhF, putative.
 
  
 0.932
Dde_1700
Hpt protein; KEGG: dvm:DvMF_0237 putative CheA signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region.
  
  
 0.930
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.