STRINGSTRING
Dde_0465 Dde_0465 Dde_0464 Dde_0464 Dde_2225 Dde_2225 Dde_2067 Dde_2067 Dde_2560 Dde_2560 Dde_3078 Dde_3078 Dde_0467 Dde_0467 Dde_1202 Dde_1202 Dde_0466 Dde_0466 Dde_3416 Dde_3416 Dde_3237 Dde_3237
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Dde_0465Thioredoxin-disulfide reductase; KEGG: dsa:Desal_1363 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region. (305 aa)    
Predicted Functional Partners:
Dde_0464
PFAM: Glutaredoxin; KEGG: dvl:Dvul_2555 glutaredoxin.
 
 
 0.907
Dde_2225
KEGG: dsa:Desal_0640 selenide, water dikinase; TIGRFAM: Selenide water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal.
     
 0.907
Dde_2067
Thioredoxin; KEGG: dvm:DvMF_0402 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
 
 0.858
Dde_2560
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.810
Dde_3078
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
  
 0.807
Dde_0467
PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; KEGG: dba:Dbac_3081 indolepyruvate ferredoxin oxidoreductase.
 
   
 0.746
Dde_1202
Thioredoxin domain-containing protein; PFAM: Thioredoxin domain; KEGG: dsa:Desal_0409 thioredoxin.
 
 
 0.682
Dde_0466
Hypothetical protein.
       0.648
Dde_3416
TIGRFAM: Thioredoxin; KEGG: mfa:Mfla_1161 thioredoxin; PFAM: Thioredoxin domain.
  
 
 0.617
Dde_3237
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.556
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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